Gene Enrichment Profiler

Mapping of probe set 210497_x_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	BC002818
  Chromosomal Location	chrXp11.22
  UniGene ID	Hs.289105
  Gene Symbol	LOC100130648, SSX2, SSX2B
  Ensembl	ENSG00000157950, ENSG00000187754
  Entrez Gene	100130648, 6757, 727837
  SwissProt	Q16385, Q8WWZ9, Q9NZK4
  RefSeq Transcript ID	NM_003147, NM_175698, XM_001719568, XM_001720499

• Annotation based on mapping results:

  This probe is not unique and matches SSX1, SSX2, SSX3, SSX4, SSX5, SSX6, SSX9.

  Only 8/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 13 alternative probes: (1) 206626_x_at, (2) 206627_s_at, (3) 207493_x_at, (4) 207666_x_at, (5) 208528_x_at, (6) 208586_s_at, (7) 210394_x_at, (8) 210497_x_at, (9) 211425_x_at, (10) 211670_x_at, (11) 211731_x_at, (12) 215881_x_at, (13) 216471_x_at.

  Affymetrix annotation for this probe: SSX2B, SSX2, LOC100130648.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chrX

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
210497_x_at_1	52806974	52806999	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	48072116	48072140	+	24/25
	52649715	52649739	+	24/25
	47910390	47910414	+	24/25
	52835725	52835749	+	24/25
	52723874	52723898	+	24/25
	48011491	48011514	+	23/25	uc004djb.1 SSX1 8
	52679391	52679414	+	23/25
	47864688	47864709	+	21/25	uc004dix.1 SSX6 8	This probe is not considered a match. Only 21/25 matches found
	48137404	48137425	+	21/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8	This probe is not considered a match. Only 21/25 matches found
	48185974	48185995	+	21/25		This probe is not considered a match. Only 21/25 matches found
	52743009	52743034	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48091130	48091155	-	25/25	uc004djd.1 SSX3 8
	52826112	52826136	-	24/25
	52690161	52690185	-	24/25	uc004dqx.1 SSX7 8
	48040142	48040166	-	24/25	uc010nib.1 SSX9 8
	47930952	47930975	-	23/25	uc004diz.1 SSX5 9 uc004dja.1 SSX5 8
	48146771	48146792	-	21/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7	This probe is not considered a match. Only 21/25 matches found
210497_x_at_2	52807010	52807035	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	52742973	52742998	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48091094	48091119	-	24/25	uc004djd.1 SSX3 8
210497_x_at_3	52807026	52807051	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	52742957	52742982	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48091078	48091103	-	25/25	uc004djd.1 SSX3 8
210497_x_at_4	52835801	52835826	+	25/25
	52807050	52807075	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	47864761	47864786	+	25/25	uc004dix.1 SSX6 8
	48186047	48186072	+	25/25
	48137477	48137502	+	25/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	52679467	52679492	+	25/25
	52649791	52649816	+	25/25
	48011567	48011592	+	25/25	uc004djb.1 SSX1 8
	47962140	47962165	+	25/25
	47910466	47910491	+	25/25
	52723950	52723975	+	24/25
	48072192	48072217	+	24/25
	52742933	52742958	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	52690084	52690109	-	25/25	uc004dqx.1 SSX7 8
	48146694	48146719	-	25/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7
	52826035	52826060	-	24/25
	48091054	48091079	-	24/25	uc004djd.1 SSX3 8
	48040065	48040090	-	24/25	uc010nib.1 SSX9 8
210497_x_at_5	52807102	52807127	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	48011619	48011644	+	25/25	uc004djb.1 SSX1 8
	47864813	47864838	+	25/25	uc004dix.1 SSX6 8
	48186099	48186124	+	25/25
	48137529	48137554	+	25/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	52724002	52724028	+	25/25
	48072244	48072266	+	22/25		This probe is not considered a match. Only 22/25 matches found
	47962192	47962214	+	22/25		This probe is not considered a match. Only 22/25 matches found
	52649843	52649876	+	25/25		This probe is not considered a match. Chr gap bases = 8
	52742881	52742906	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48146642	48146667	-	25/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7
	48091002	48091027	-	25/25	uc004djd.1 SSX3 8
	48040013	48040038	-	24/25	uc010nib.1 SSX9 8
	47930823	47930848	-	24/25	uc004diz.1 SSX5 9 uc004dja.1 SSX5 8
	52825988	52826008	-	20/25		This probe is not considered a match. Only 20/25 matches found
210497_x_at_6	48011662	48011687	+	24/25	uc004djb.1 SSX1 8
	48137550	48137592	+	25/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8	This probe is not considered a match. Chr gap bases = 17
	52835870	52835938	+	25/25		This probe is not considered a match. Chr gap bases = 43
	52807138	52807206	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9	This probe is not considered a match. Chr gap bases = 43
	48186137	48186162	+	23/25
	47962209	47962253	+	25/25		This probe is not considered a match. Chr gap bases = 19
	47910535	47910585	+	25/25		This probe is not considered a match. Chr gap bases = 25
	47864834	47864876	+	25/25	uc004dix.1 SSX6 8	This probe is not considered a match. Chr gap bases = 17
	48039964	48039989	-	24/25	uc010nib.1 SSX9 8
	52742806	52742870	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9	This probe is not considered a match. Chr gap bases = 39
	52689972	52690040	-	25/25	uc004dqx.1 SSX7 8	This probe is not considered a match. Chr gap bases = 43
	48146604	48146646	-	25/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7	This probe is not considered a match. Chr gap bases = 17
	48090941	48090995	-	25/25	uc004djd.1 SSX3 8	This probe is not considered a match. Chr gap bases = 29
210497_x_at_7	52807201	52807226	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	52679582	52679607	+	24/25
	48011682	48011707	+	24/25	uc004djb.1 SSX1 8
	47910580	47910605	+	24/25
	48137587	48137611	+	23/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	47864871	47864895	+	23/25	uc004dix.1 SSX6 8
	48186157	48186181	+	22/25		This probe is not considered a match. Only 22/25 matches found
	47962248	47962272	+	22/25		This probe is not considered a match. Only 22/25 matches found
	52742786	52742811	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48090921	48090946	-	24/25	uc004djd.1 SSX3 8
	48039944	48039969	-	24/25	uc010nib.1 SSX9 8
210497_x_at_8	52807255	52807280	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	52679636	52679661	+	24/25
	52649967	52649992	+	24/25
	48186212	48186237	+	24/25
	48137642	48137667	+	24/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	48011736	48011761	+	24/25	uc004djb.1 SSX1 8
	47962303	47962328	+	24/25
	47864926	47864951	+	24/25	uc004dix.1 SSX6 8
	52742732	52742757	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48090867	48090892	-	25/25	uc004djd.1 SSX3 8
	48146529	48146554	-	24/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7
	48039889	48039914	-	24/25	uc010nib.1 SSX9 8
	47930660	47930685	-	24/25	uc004diz.1 SSX5 9 uc004dja.1 SSX5 8
210497_x_at_9	48011275	48011300	+	25/25	uc004djb.1 SSX1 8
	48185753	48185778	+	25/25
	48137184	48137209	+	25/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	47910176	47910201	+	25/25
	52679175	52679200	+	25/25
	47961851	47961876	+	25/25
	52806758	52806783	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	47864468	47864493	+	24/25	uc004dix.1 SSX6 8
	48071899	48071924	+	24/25
	52835508	52835533	+	24/25
	52743225	52743250	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	52690377	52690402	-	25/25	uc004dqx.1 SSX7 8
	48146987	48147012	-	25/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7
	48091346	48091371	-	25/25	uc004djd.1 SSX3 8
	47931168	47931193	-	25/25	uc004diz.1 SSX5 9 uc004dja.1 SSX5 8
	48040356	48040381	-	24/25	uc010nib.1 SSX9 8
210497_x_at_10	52835541	52835566	+	25/25
	48137217	48137242	+	25/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	52806791	52806816	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	52723690	52723715	+	25/25
	52649531	52649556	+	25/25
	48185786	48185811	+	25/25
	52679208	52679232	+	24/25
	48011309	48011333	+	24/25	uc004djb.1 SSX1 8
	47864501	47864526	+	24/25	uc004dix.1 SSX6 8
	47961884	47961909	+	24/25
	52826295	52826320	-	25/25
	52743192	52743217	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	52690344	52690369	-	25/25	uc004dqx.1 SSX7 8
	48146954	48146979	-	25/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7
	48091313	48091338	-	25/25	uc004djd.1 SSX3 8
	48040323	48040348	-	25/25	uc010nib.1 SSX9 8
	47931135	47931159	-	23/25	uc004diz.1 SSX5 9 uc004dja.1 SSX5 8
210497_x_at_11	52679264	52679289	+	25/25
	47864558	47864583	+	25/25	uc004dix.1 SSX6 8
	48071989	48072014	+	25/25
	52649588	52649613	+	25/25
	47961941	47961966	+	25/25
	48137274	48137299	+	25/25	uc004djg.1 SSX4 7 uc004djf.1 SSX4 8
	52723747	52723772	+	25/25
	48011364	48011389	+	25/25	uc004djb.1 SSX1 8
	52806848	52806873	+	25/25	uc004drb.1 SSX2 8 uc004dra.1 SSX2 9
	48185843	48185868	+	24/25
	47910265	47910290	+	24/25
	52835598	52835623	+	23/25
	52826238	52826263	-	25/25
	52743135	52743160	-	25/25	uc004dqz.1 SSX2 8 uc004dqy.1 SSX2 9
	48146897	48146922	-	25/25	uc004djh.1 SSX4 8 uc004dji.1 SSX4 7
	48091256	48091281	-	25/25	uc004djd.1 SSX3 8
	47931078	47931103	-	25/25	uc004diz.1 SSX5 9 uc004dja.1 SSX5 8

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