| Representative Public ID | NM_005635 |
| Chromosomal Location | chrXp11.23-p11.22 |
| UniGene ID | Hs.694472 |
| Gene Symbol | SSX1 |
| Ensembl | ENSG00000126752 |
| Entrez Gene | 6756 |
| SwissProt | A3KN76, Q16384, Q7RTT4 |
| RefSeq Transcript ID | NM_005635 |
| This probe is unique to SSX1. |
| Only 8/11 probes within this probe set were perfectly matched to the annotated transcript. |
| This gene has 7 alternative probes: (1) 206626_x_at, (2) 206627_s_at, (3) 207666_x_at, (4) 210394_x_at, (5) 210497_x_at, (6) 211425_x_at, (7) 216471_x_at. |
| Affymetrix annotation for this probe: SSX1. |
| Brainarray annotation for this probe: SSX1. |
| Probe name | Start | End | Strand | Match | Gene match (UCSC ID, Symbol, Exons) | Notes | ||||||||
| 206627_s_at_1 | 52671328 | 52671353 | + | 25/25 | ||||||||||
| 48002176 | 48002201 | + | 25/25 |
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| 206627_s_at_2 | 48002207 | 48002232 | + | 25/25 |
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| 52671359 | 52671384 | + | 24/25 | |||||||||||
| 206627_s_at_3 | 48002211 | 48002236 | + | 25/25 |
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| 52671363 | 52671388 | + | 24/25 | |||||||||||
| 206627_s_at_4 | 52672098 | 52672123 | + | 25/25 | ||||||||||
| 48002946 | 48002971 | + | 25/25 |
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| 48098416 | 48098441 | - | 23/25 |
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| 206627_s_at_5 | 48002982 | 48003007 | + | 25/25 |
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| 52672134 | 52672159 | + | 24/25 | |||||||||||
| 206627_s_at_6 | 48002986 | 48003010 | + | 24/25 |
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| 52672138 | 52672162 | + | 23/25 | |||||||||||
| 206627_s_at_7 | ||||||||||||||
| 206627_s_at_8 | ||||||||||||||
| 206627_s_at_9 | 48008171 | 48008196 | + | 25/25 |
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| 52803666 | 52803691 | + | 23/25 |
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| 52720216 | 52720241 | + | 23/25 | |||||||||||
| 52676056 | 52676081 | + | 23/25 | |||||||||||
| 48133742 | 48133767 | + | 23/25 |
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| 47958894 | 47958919 | + | 23/25 | |||||||||||
| 52829806 | 52829831 | - | 23/25 | |||||||||||
| 52746317 | 52746342 | - | 23/25 |
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| 52694135 | 52694160 | - | 23/25 |
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| 48150429 | 48150454 | - | 23/25 |
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| 47934612 | 47934637 | - | 23/25 |
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| 206627_s_at_10 | 52676080 | 52676105 | + | 25/25 | ||||||||||
| 48008195 | 48008220 | + | 25/25 |
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| 47861372 | 47861397 | + | 24/25 |
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| 52694111 | 52694136 | - | 24/25 |
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| 52652393 | 52652418 | - | 24/25 | |||||||||||
| 47934588 | 47934613 | - | 24/25 |
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| 206627_s_at_11 | 52676163 | 52676363 | + | 25/25 | This probe is not considered a match. Chr gap bases = 175 | |||||||||
| 48008277 | 48008688 | + | 25/25 |
|
This probe is not considered a match. Chr gap bases = 386 |