Gene Enrichment Profiler

Mapping of probe set 213428_s_at to genomic DNA


Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr21
Probe name Start End Strand Match Gene match (UCSC ID, Symbol, Exons) Notes
213428_s_at_1 46249089 46249114 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_2 46249114 46249139 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_3 46249132 46249157 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_4 46249180 46249205 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_5 46249216 46249241 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
41821510 41821632 + 24/25
uc010gos.1 TMPRSS2 in intron
This probe is not considered a match. Chr gap bases = 98
213428_s_at_6 46249231 46249256 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_7 46249293 46249318 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_8 46249306 46249331 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_9 46249343 46249368 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_10 46248951 46248976 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6
213428_s_at_11 46248975 46249000 + 25/25
uc002zhu.1 COL6A1 35
uc002zhw.1 COL6A1 3
uc010gqd.1 COL6A1 13
uc002zhv.1 COL6A1 6