Gene Enrichment Profiler

Mapping of probe set 219466_s_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	NM_001643
  Chromosomal Location	chr1q21-q23
  UniGene ID	Hs.237658
  Gene Symbol	APOA2
  Ensembl	ENSG00000158874
  Entrez Gene	336
  SwissProt	B2R524, P02652, Q76EI7
  RefSeq Transcript ID	NM_001643

• Annotation based on mapping results:

  This probe is unique to APOA2.

  Only 10/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has an alternative probe: 219465_at.

  Affymetrix annotation for this probe: APOA2.

  Brainarray annotation for this probe: APOA2.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr1

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
219466_s_at_1	159458920	159459340	-	25/25	uc001fzc.1 APOA2 4, 3 uc001fzb.1 APOA2 2	This probe is not considered a match. Chr gap bases = 395
219466_s_at_2	159458895	159458920	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_3	159458870	159458895	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_4	159458862	159458887	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_5	159458854	159458879	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_6	159458848	159458873	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_7	159458843	159458868	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_8	159458831	159458856	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_9	159458804	159458829	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_10	159458795	159458820	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2
219466_s_at_11	159458793	159458818	-	25/25	uc001fzc.1 APOA2 4 uc001fzb.1 APOA2 2

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