Gene Enrichment Profiler

Mapping of probe set 219465_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	NM_001643
  Chromosomal Location	chr1q21-q23
  UniGene ID	Hs.237658
  Gene Symbol	APOA2
  Ensembl	ENSG00000158874
  Entrez Gene	336
  SwissProt	B2R524, P02652, Q76EI7
  RefSeq Transcript ID	NM_001643

• Annotation based on mapping results:

  This probe is unique to APOA2.

  Only 9/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has an alternative probe: 219466_s_at.

  Affymetrix annotation for this probe: APOA2.

  Brainarray annotation for this probe: APOA2.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr1

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
219465_at_1	159459762	159459783	-	21/25	uc001fzc.1 APOA2 2 uc001fzb.1 APOA2 1	This probe is not considered a match. Only 21/25 matches found
219465_at_2	159459442	159459466	-	24/25	uc001fzc.1 APOA2 3
219465_at_3	159459439	159459464	-	25/25	uc001fzc.1 APOA2 3
219465_at_4	159460015	159460040	-	25/25	uc001fzc.1 APOA2 1
219465_at_5	159459397	159459422	-	25/25	uc001fzc.1 APOA2 3
219465_at_6	159459389	159459414	-	25/25	uc001fzc.1 APOA2 3
219465_at_7	159459384	159459409	-	25/25	uc001fzc.1 APOA2 3
219465_at_8	159459378	159459403	-	25/25	uc001fzc.1 APOA2 3
219465_at_9	159460007	159460029	-	22/25	uc001fzc.1 APOA2 1	This probe is not considered a match. Only 22/25 matches found
219465_at_10	159459801	159459826	-	25/25	uc001fzc.1 APOA2 2 uc001fzb.1 APOA2 1
219465_at_11	159459788	159459813	-	25/25	uc001fzc.1 APOA2 2 uc001fzb.1 APOA2 1

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