Gene Enrichment Profiler

Mapping of probe set 211377_x_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	AF320053
  Chromosomal Location	chr2p24.1
  UniGene ID	Hs.25960
  Gene Symbol	MYCN
  Ensembl	ENSG00000134323
  Entrez Gene	4613
  SwissProt	P04198, Q53XS5, Q7Z7Q9, Q9H224, Q9UMQ5
  RefSeq Transcript ID	NM_005378

• Annotation based on mapping results:

  This probe is unique to MYCN.

  Only 9/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 3 alternative probes: (1) 209756_s_at, (2) 209757_s_at, (3) 211377_x_at.

  Affymetrix annotation for this probe: MYCN.

  Brainarray annotation for this probe: MYCN.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr2

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
211377_x_at_1	15998139	15998164	+	25/25	uc002rci.1 MYCN 1
211377_x_at_2
211377_x_at_3
211377_x_at_4	15999596	15999621	+	25/25	uc002rci.1 MYCN 2 uc002rcj.1 MYCN 1
211377_x_at_5	15999651	15999676	+	25/25	uc002rci.1 MYCN 2 uc002rcj.1 MYCN 1
211377_x_at_6	15999661	15999686	+	25/25	uc002rci.1 MYCN 2 uc002rcj.1 MYCN 1
211377_x_at_7	15998165	15998190	+	25/25	uc002rci.1 MYCN 1
211377_x_at_8	15998177	15998202	+	25/25	uc002rci.1 MYCN 1
211377_x_at_9	15998192	15998217	+	25/25	uc002rci.1 MYCN 1
211377_x_at_10	15998206	15998231	+	25/25	uc002rci.1 MYCN 1
211377_x_at_11	15998212	15998237	+	25/25	uc002rci.1 MYCN 1

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