Gene Enrichment Profiler

Mapping of probe set 209757_s_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	BC002712
  Chromosomal Location	chr2p24.1
  UniGene ID	Hs.25960
  Gene Symbol	MYCN
  Ensembl	ENSG00000134323
  Entrez Gene	4613
  SwissProt	P04198, Q53XS5, Q7Z7Q9, Q9H224, Q9UMQ5
  RefSeq Transcript ID	NM_005378

• Annotation based on mapping results:

  This probe is unique to MYCN.

  All 11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 3 alternative probes: (1) 209756_s_at, (2) 209757_s_at, (3) 211377_x_at.

  Affymetrix annotation for this probe: MYCN.

  Brainarray annotation for this probe: MYCN.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr2

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
209757_s_at_1	16004020	16004045	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_2	16004034	16004059	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_3	16004047	16004072	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_4	16004070	16004095	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_5	16004081	16004106	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_6	16004118	16004143	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_7	16004162	16004187	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_8	16004232	16004257	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_9	16004248	16004273	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_10	16004443	16004468	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2
209757_s_at_11	16004501	16004526	+	25/25	uc002rci.1 MYCN 3 uc002rcj.1 MYCN 2

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