Gene Enrichment Profiler

Mapping of probe set 210079_x_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	U16953
  Chromosomal Location	chr3q26.1
  UniGene ID	Hs.654519
  Gene Symbol	KCNAB1
  Ensembl	ENSG00000169282
  Entrez Gene	7881
  SwissProt	A6NP06, A8K9H8, A8KAD4, Q14722, Q5MJQ3
  RefSeq Transcript ID	NM_003471, NM_172159, NM_172160

• Annotation based on mapping results:

  This probe is unique to KCNAB1.

  Only 10/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 4 alternative probes: (1) 208213_s_at, (2) 210078_s_at, (3) 210079_x_at, (4) 210471_s_at.

  Affymetrix annotation for this probe: KCNAB1.

  Brainarray annotation for this probe: KCNAB1.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr3

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
210079_x_at_1	157724387	157724412	+	25/25	uc003far.2 KCNAB1 12 uc010hvt.1 KCNAB1 11 uc003fas.2 KCNAB1 12 uc003fat.2 KCNAB1 12
210079_x_at_2	157724406	157724430	+	24/25	uc003far.2 KCNAB1 12 uc010hvt.1 KCNAB1 11 uc003fas.2 KCNAB1 12 uc003fat.2 KCNAB1 12
210079_x_at_3
210079_x_at_4	157731936	157731961	+	25/25	uc003far.2 KCNAB1 13 uc010hvt.1 KCNAB1 12 uc003fas.2 KCNAB1 13 uc003fat.2 KCNAB1 13
210079_x_at_5	157737181	157737206	+	25/25	uc003far.2 KCNAB1 14 uc010hvt.1 KCNAB1 13 uc003fas.2 KCNAB1 14 uc003fat.2 KCNAB1 14
210079_x_at_6	157737261	157737286	+	25/25	uc003far.2 KCNAB1 14 uc010hvt.1 KCNAB1 13 uc003fas.2 KCNAB1 14 uc003fat.2 KCNAB1 14
210079_x_at_7	157737320	157737347	+	25/25	uc003far.2 KCNAB1 14 uc010hvt.1 KCNAB1 13 uc003fas.2 KCNAB1 14 uc003fat.2 KCNAB1 14
210079_x_at_8	157737346	157737371	+	25/25	uc003far.2 KCNAB1 14 uc010hvt.1 KCNAB1 13 uc003fas.2 KCNAB1 14 uc003fat.2 KCNAB1 14
210079_x_at_9	157737363	157737387	+	24/25	uc003far.2 KCNAB1 14 uc010hvt.1 KCNAB1 13 uc003fas.2 KCNAB1 14 uc003fat.2 KCNAB1 14
210079_x_at_10	157737378	157737403	+	25/25	uc003far.2 KCNAB1 14 uc010hvt.1 KCNAB1 13 uc003fas.2 KCNAB1 14 uc003fat.2 KCNAB1 14
210079_x_at_11	157716817	157716842	+	25/25	uc003far.2 KCNAB1 11 uc010hvt.1 KCNAB1 10 uc003fas.2 KCNAB1 11 uc003fat.2 KCNAB1 11

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