Gene Enrichment Profiler

Mapping of probe set 208779_x_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	L20817
  Chromosomal Location	chr6p21.3
  UniGene ID	Hs.631988
  Gene Symbol	DDR1
  Ensembl	ENSG00000137332, ENSG00000204580, ENSG00000215522
  Entrez Gene	780
  SwissProt	A2ABK8, A2ABK9, A2ABL0, A2ABL1, A2ABL2, A2ABL3, A2ABL4, A2ABM8, Q08345, Q2L6H3, Q4LE50, Q5ST11, Q6NSK4, Q6ZNR9, Q96T61, Q96T62, Q9UD36, Q9UD86
  RefSeq Transcript ID	NM_001954, NM_013993, NM_013994

• Annotation based on mapping results:

  This probe is unique to DDR1.

  Only 9/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 4 alternative probes: (1) 1007_s_at, (2) 207169_x_at, (3) 208779_x_at, (4) 210749_x_at.

  Affymetrix annotation for this probe: DDR1.

  Brainarray annotation for this probe: DDR1.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr6

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
208779_x_at_1	30975326	30975351	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_2	30975403	30975428	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_3	30975472	30975497	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_4	30975519	30975544	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_5	30975579	30975604	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_6	30975637	30975662	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_7	30975666	30975688	+	22/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18	This probe is not considered a match. Only 22/25 matches found
208779_x_at_8
208779_x_at_9	30975731	30975756	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_10	30975746	30975771	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
208779_x_at_11	30975854	30975880	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18

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