Gene Enrichment Profiler

Mapping of probe set 1007_s_at to genomic DNA

• This probe set contains 16 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	U48705
  Chromosomal Location	chr6p21.3
  UniGene ID	Hs.631988
  Gene Symbol	DDR1
  Ensembl	ENSG00000137332, ENSG00000204580, ENSG00000215522
  Entrez Gene	780
  SwissProt	A2ABK8, A2ABK9, A2ABL0, A2ABL1, A2ABL2, A2ABL3, A2ABL4, A2ABM8, Q08345, Q2L6H3, Q4LE50, Q5ST11, Q6NSK4, Q6ZNR9, Q96T61, Q96T62, Q9UD36, Q9UD86
  RefSeq Transcript ID	NM_001954, NM_013993, NM_013994

• Annotation based on mapping results:

  This probe is unique to DDR1.

  All 16 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 4 alternative probes: (1) 1007_s_at, (2) 207169_x_at, (3) 208779_x_at, (4) 210749_x_at.

  Affymetrix annotation for this probe: DDR1.

  Brainarray annotation for this probe: DDR1.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr6

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
1007_s_at_1	30975289	30975314	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_2	30975402	30975427	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_3	30975471	30975496	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_4	30975522	30975547	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_5	30975529	30975554	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_6	30975535	30975560	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_7	30975542	30975567	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_8	30975548	30975573	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_9	30975574	30975599	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_10	30975671	30975696	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_11	30975744	30975769	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_12	30975751	30975776	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_13	30975757	30975782	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
	17567637	17567687	-	24/25	uc010jpk.1 CAP2 in intron uc003ncb.1 CAP2 in intron	This probe is not considered a match. Chr gap bases = 26
1007_s_at_14	30975765	30975790	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_15	30975830	30975855	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18
1007_s_at_16	30975837	30975862	+	25/25	uc003nrv.1 DDR1 17 uc003nrr.1 DDR1 19 uc003nrq.1 DDR1 19 uc003nrt.1 DDR1 17 uc010jse.1 DDR1 17 uc003nru.1 DDR1 16 uc003nrs.1 DDR1 18

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