Gene Enrichment Profiler

Mapping of probe set AFFX-ThrX-M_at to genomic DNA

• This probe set contains 20 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	AFFX-ThrX-M
  Chromosomal Location	---
  UniGene ID	---
  Gene Symbol	---
  Ensembl	---
  Entrez Gene	---
  SwissProt	P04948, P04990, P19582, P39839
  RefSeq Transcript ID	---

• Annotation based on mapping results:

  This is a control probe.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr9

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
AFFX-ThrX-M_at_1
AFFX-ThrX-M_at_2
AFFX-ThrX-M_at_3
AFFX-ThrX-M_at_4
AFFX-ThrX-M_at_5
AFFX-ThrX-M_at_6
AFFX-ThrX-M_at_7
AFFX-ThrX-M_at_8
AFFX-ThrX-M_at_9
AFFX-ThrX-M_at_10
AFFX-ThrX-M_at_11
AFFX-ThrX-M_at_12
AFFX-ThrX-M_at_13
AFFX-ThrX-M_at_14
AFFX-ThrX-M_at_15
AFFX-ThrX-M_at_16
AFFX-ThrX-M_at_17
AFFX-ThrX-M_at_18
AFFX-ThrX-M_at_19
AFFX-ThrX-M_at_20	123478325	123478350	+	23/25	uc004bln.1 DAB2IP in intron

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Mapping to chr12

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
AFFX-ThrX-M_at_1
AFFX-ThrX-M_at_2	84953237	84953320	+	24/25	uc001taj.2 MGAT4C in intron uc001tah.2 MGAT4C in intron uc001tak.2 MGAT4C in intron uc001tal.2 MGAT4C in intron uc001tai.2 MGAT4C in intron	This probe is not considered a match. Chr gap bases = 59
AFFX-ThrX-M_at_3
AFFX-ThrX-M_at_4
AFFX-ThrX-M_at_5
AFFX-ThrX-M_at_6
AFFX-ThrX-M_at_7
AFFX-ThrX-M_at_8
AFFX-ThrX-M_at_9
AFFX-ThrX-M_at_10
AFFX-ThrX-M_at_11
AFFX-ThrX-M_at_12
AFFX-ThrX-M_at_13
AFFX-ThrX-M_at_14
AFFX-ThrX-M_at_15
AFFX-ThrX-M_at_16
AFFX-ThrX-M_at_17
AFFX-ThrX-M_at_18
AFFX-ThrX-M_at_19
AFFX-ThrX-M_at_20

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