Gene Enrichment Profiler

Mapping of probe set 212154_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	AI380298
  Chromosomal Location	chr8q22-q23
  UniGene ID	Hs.1501
  Gene Symbol	SDC2
  Ensembl	ENSG00000169439
  Entrez Gene	6383
  SwissProt	B3KQA3, P34741, Q6PIS6
  RefSeq Transcript ID	NM_002998

• Annotation based on mapping results:

  This probe is unique to SDC2.

  Only 8/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has 3 alternative probes: (1) 212154_at, (2) 212157_at, (3) 212158_at.

  Affymetrix annotation for this probe: SDC2.

  Brainarray annotation for this probe: SDC2.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr8

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
212154_at_1
212154_at_2	97690796	97690821	+	25/25	uc003yhv.1 SDC2 5
212154_at_3	97690893	97690918	+	25/25	uc003yhv.1 SDC2 5
212154_at_4	97690909	97690934	+	25/25	uc003yhv.1 SDC2 5
212154_at_5	97690950	97690975	+	25/25	uc003yhv.1 SDC2 5
212154_at_6
212154_at_7	97683821	97683846	+	25/25	uc003yhv.1 SDC2 3
212154_at_8	97683836	97683861	+	25/25	uc003yhv.1 SDC2 3
212154_at_9	97683853	97683878	+	25/25	uc003yhv.1 SDC2 3
212154_at_10
212154_at_11	97689758	97689783	+	25/25	uc003yhv.1 SDC2 4

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