Gene Enrichment Profiler

Mapping of probe set 208607_s_at to genomic DNA

• This probe set contains 11 probes
• Affymetrix annotation for this probe set:
  

  Representative Public ID	NM_030754
  Chromosomal Location	chr11p15.1, chr11p15.1-p14
  UniGene ID	Hs.632144
  Gene Symbol	SAA1, SAA2
  Ensembl	ENSG00000134339, ENSG00000173432
  Entrez Gene	6288, 6289
  SwissProt	P02735, Q15423, Q16782, Q6FG67
  RefSeq Transcript ID	NM_000331, NM_001127380, NM_030754, NM_199161

• Annotation based on mapping results:

  This probe is not unique and matches SAA1, SAA2.

  Only 7/11 probes within this probe set were perfectly matched to the annotated transcript.

  This gene has an alternative probe: 214456_x_at.

  Affymetrix annotation for this probe: SAA1, SAA2.

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Probes matching to Affy annotated chromosome using BLAT (2 mismatches allowed):

Mapping to chr11

Probe name	Start	End	Strand	Match	Gene match (UCSC ID, Symbol, Exons)	Notes
208607_s_at_1	18247316	18247338	+	22/25	uc001moa.2 SAA1 4 uc009yhk.1 SAA1 3 uc009yhl.1 SAA1 3	This probe is not considered a match. Only 22/25 matches found
	18224150	18224172	-	22/25	uc001mnz.2 SAA2 3 uc009yhj.1 SAA2 3	This probe is not considered a match. Only 22/25 matches found
208607_s_at_2	18247346	18247371	+	25/25	uc001moa.2 SAA1 4 uc009yhk.1 SAA1 3 uc009yhl.1 SAA1 3
	18224117	18224142	-	25/25	uc001mnz.2 SAA2 3 uc009yhj.1 SAA2 3
208607_s_at_3	18247354	18247379	+	25/25	uc001moa.2 SAA1 4 uc009yhk.1 SAA1 3 uc009yhl.1 SAA1 3
	18224109	18224134	-	25/25	uc001mnz.2 SAA2 3 uc009yhj.1 SAA2 3
208607_s_at_4	18247398	18247423	+	25/25	uc001moa.2 SAA1 4 uc009yhk.1 SAA1 3 uc009yhl.1 SAA1 3
	18224065	18224090	-	25/25	uc001mnz.2 SAA2 3 uc009yhj.1 SAA2 3
208607_s_at_5	18247406	18247431	+	25/25	uc001moa.2 SAA1 4 uc009yhk.1 SAA1 3 uc009yhl.1 SAA1 3
	18224057	18224082	-	25/25	uc001mnz.2 SAA2 3 uc009yhj.1 SAA2 3
208607_s_at_6	18247408	18247433	+	25/25	uc001moa.2 SAA1 4 uc009yhk.1 SAA1 3 uc009yhl.1 SAA1 3
	18224055	18224080	-	25/25	uc001mnz.2 SAA2 3 uc009yhj.1 SAA2 3
	18210540	18210565	-	23/25	uc001mny.1 SAA4 3
208607_s_at_7	18245074	18245099	+	25/25	uc001moa.2 SAA1 3 uc009yhk.1 SAA1 2 uc009yhl.1 SAA1 2
	18226045	18226070	-	25/25	uc001mnz.2 SAA2 2 uc009yhj.1 SAA2 2
208607_s_at_8	18245077	18245102	+	25/25	uc001moa.2 SAA1 3 uc009yhk.1 SAA1 2 uc009yhl.1 SAA1 2
	18226042	18226067	-	25/25	uc001mnz.2 SAA2 2 uc009yhj.1 SAA2 2
208607_s_at_9	18245081	18245102	+	21/25	uc001moa.2 SAA1 3 uc009yhk.1 SAA1 2 uc009yhl.1 SAA1 2	This probe is not considered a match. Only 21/25 matches found
	18226042	18226063	-	21/25	uc001mnz.2 SAA2 2 uc009yhj.1 SAA2 2	This probe is not considered a match. Only 21/25 matches found
208607_s_at_10
208607_s_at_11

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